PANDA_020717 protein (Ailuropoda melanoleuca)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

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Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

PANDA_020717

Uncharacterized protein. (405 aa)

Predicted Functional Partners:

GINS3

0.452

PSPC1

0.436

ZBTB3

0.400

Your Current Organism:

Ailuropoda melanoleuca

NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GINS3	PANDA_020717	ENSAMEP00000018229	ENSAMEP00000003350	GINS complex subunit 3.	Uncharacterized protein.	0.452
GINS3	ZBTB3	ENSAMEP00000018229	ENSAMEP00000006754	GINS complex subunit 3.	Zinc finger and BTB domain containing 3.	0.512
PANDA_020717	GINS3	ENSAMEP00000003350	ENSAMEP00000018229	Uncharacterized protein.	GINS complex subunit 3.	0.452
PANDA_020717	PSPC1	ENSAMEP00000003350	ENSAMEP00000018418	Uncharacterized protein.	Paraspeckle component 1.	0.436
PANDA_020717	ZBTB3	ENSAMEP00000003350	ENSAMEP00000006754	Uncharacterized protein.	Zinc finger and BTB domain containing 3.	0.400
PSPC1	PANDA_020717	ENSAMEP00000018418	ENSAMEP00000003350	Paraspeckle component 1.	Uncharacterized protein.	0.436
ZBTB3	GINS3	ENSAMEP00000006754	ENSAMEP00000018229	Zinc finger and BTB domain containing 3.	GINS complex subunit 3.	0.512
ZBTB3	PANDA_020717	ENSAMEP00000006754	ENSAMEP00000003350	Zinc finger and BTB domain containing 3.	Uncharacterized protein.	0.400