Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CDK7Cyclin dependent kinase 7; Belongs to the protein kinase superfamily. (354 aa)    
Predicted Functional Partners:
CCNH
Cyclin H; Belongs to the cyclin family.
   
 0.999
MNAT1
MNAT1 component of CDK activating kinase.
   
 0.996
CDK2
Cyclin dependent kinase 2; Belongs to the protein kinase superfamily.
   
 0.995
ERCC3
ERCC excision repair 3, TFIIH core complex helicase subunit.
    
 0.992
GTF2H3
General transcription factor IIH subunit 3.
   
 0.991
ERCC2
ERCC excision repair 2, TFIIH core complex helicase subunit.
    
 0.989
GTF2H1
General transcription factor IIH subunit 1.
    
 0.987
CDK1
Cyclin dependent kinase 1; Belongs to the protein kinase superfamily.
   
 0.984
GTF2H4
General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
    
 0.984
GTF2H5
General transcription factor IIH subunit 5.
    
 0.979
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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