STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBNO2Strawberry notch homolog 2. (1197 aa)    
Predicted Functional Partners:
ARHGAP45
Rho GTPase activating protein 45.
      
 0.761
ARID5A
AT-rich interaction domain 5A.
   
  
 0.663
GAL3ST4
Galactose-3-O-sulfotransferase 4.
      
 0.611
POLR2E
RNA polymerase II subunit E.
      
 0.609
G1L955_AILME
Uncharacterized protein.
   
  
 0.559
PIK3AP1
Phosphoinositide-3-kinase adaptor protein 1.
      
 0.538
P2RY2
Purinergic receptor P2Y2; Belongs to the G-protein coupled receptor 1 family.
      
 0.526
INPP5K
Inositol polyphosphate-5-phosphatase K.
      
 0.514
ARHGEF28
Rho guanine nucleotide exchange factor 28.
   
  
 0.491
LRRC25
Leucine rich repeat containing 25.
      
 0.489
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.