STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHYHIPPhytanoyl-CoA 2-hydroxylase interacting protein. (333 aa)    
Predicted Functional Partners:
GJD4
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
      
 0.509
SLC26A10
Solute carrier family 26 member 10.
      
 0.506
RETSAT
Retinol saturase.
      
 0.478
RTN4RL2
Reticulon 4 receptor like 2.
      
 0.478
LIMS2
LIM and senescent cell antigen-like-containing domain protein; Adapter protein in a cytoplasmic complex linking beta- integrins to the actin cytoskeleton, bridges the complex to cell surface receptor tyrosine kinases and growth factor receptors.
      
 0.475
ARNTL2
Aryl hydrocarbon receptor nuclear translocator like 2.
      
 0.456
PLCL1
Phosphoinositide phospholipase C.
      
 0.456
CIART
Circadian associated repressor of transcription.
      
 0.454
RASL11A
RAS like family 11 member A.
      
 0.452
ZFAND3
Zinc finger AN1-type containing 3.
      
 0.442
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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