STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC47Coiled-coil domain containing 47. (486 aa)    
Predicted Functional Partners:
TMCO1
Transmembrane and coiled-coil domains 1.
    
 0.942
TMEM147
Transmembrane protein 147.
   
 
 0.910
WDR83OS
WD repeat domain 83 opposite strand.
    
 0.898
G1LFY3_AILME
Peptidase_M28 domain-containing protein.
    
 0.862
SEC61B
SEC61 translocon beta subunit.
    
 
 0.845
RPL8
Ribosomal protein L8.
   
 
 0.797
G1L3N0_AILME
Uncharacterized protein.
    
 
 0.793
SEC61A2
SEC61 translocon alpha 2 subunit; Belongs to the SecY/SEC61-alpha family.
   
 
 0.767
SEC61A1
SEC61 translocon alpha 1 subunit.
   
 
 0.767
RPL18A
60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.
   
   0.764
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.