STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC47Coiled-coil domain containing 47. (486 aa)    
Predicted Functional Partners:
TMEM147
Transmembrane protein 147.
    
 
 0.962
WDR83OS
WD repeat domain 83 opposite strand.
    
 0.936
TMCO1
Transmembrane and coiled-coil domains 1.
    
 
 0.917
SEC61A2
SEC61 translocon alpha 2 subunit; Belongs to the SecY/SEC61-alpha family.
   
 
 0.903
SEC61A1
SEC61 translocon alpha 1 subunit.
   
 
 0.903
G1L3N0_AILME
Uncharacterized protein.
    
 
 0.901
G1LFY3_AILME
Peptidase_M28 domain-containing protein.
    
 
 0.901
RPL18A
60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.
   
   0.830
RPL3
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
   
   0.829
RPL11
Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.
   
   0.827
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.