STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ODF3Outer dense fiber of sperm tails 3. (257 aa)    
Predicted Functional Partners:
PKDREJ
Polycystin family receptor for egg jelly.
      
 0.696
ODF4
Uncharacterized protein.
      
 0.643
DNAH17
Dynein axonemal heavy chain 17.
   
  
 0.628
SPEM1
Spermatid maturation 1.
      
 0.606
CABYR
Calcium binding tyrosine phosphorylation regulated.
      
 0.551
ARMC3
Armadillo repeat containing 3.
   
  
 0.545
LOC100473656
Uncharacterized protein.
   
  
 0.521
TEKT3
Tektin 3.
   
  
 0.510
TSGA10
Testis specific 10.
      
 0.479
PACRG-2
Uncharacterized protein.
   
  
 0.477
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.