STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCN1Lipocalin 1; Belongs to the calycin superfamily. Lipocalin family. (190 aa)    
Predicted Functional Partners:
LCN9
Lipocalin 9; Belongs to the calycin superfamily. Lipocalin family.
   
 
0.662
G1LK14_AILME
Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.
   
 
0.555
APOD
Apolipoprotein D.
   
 
 0.533
LCN12
Lipocalin 12; Belongs to the calycin superfamily. Lipocalin family.
   
 
 0.514
G1LJY7_AILME
Uncharacterized protein; Belongs to the calycin superfamily. Lipocalin family.
   
 
 0.504
G1M9R7_AILME
Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.
   
 
 0.497
LCN15
Lipocalin 15; Belongs to the calycin superfamily. Lipocalin family.
   
 
 0.492
LOC100464677
Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.
   
 
0.480
LTF
Lactotransferrin; Belongs to the transferrin family.
   
 0.469
TTR
Transthyretin; Thyroid hormone-binding protein. Probably transports thyroxine from the bloodstream to the brain.
   
  
 0.456
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.