STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CIRBPCold inducible RNA binding protein. (258 aa)    
Predicted Functional Partners:
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 0.963
G1LU58_AILME
Uncharacterized protein.
   
 
 0.814
PRMT1
Protein arginine methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
   
 
 0.814
KHDRBS1
KH RNA binding domain containing, signal transduction associated 1.
   
 
 0.715
TNPO3
Transportin 3.
   
 0.714
ELAVL1
ELAV-like protein; Belongs to the RRM elav family.
  
0.712
SF3A2
Splicing factor 3a subunit 2.
   
 
 0.676
G1LIT5_AILME
RRM domain-containing protein.
   
 0.618
SRSF9
Serine and arginine rich splicing factor 9.
   
 0.613
NCL
Nucleolin.
   
 0.611
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.