G1L9B5_AILME protein (Ailuropoda melanoleuca)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

G1L9B5_AILME

Uncharacterized protein. (178 aa)

Predicted Functional Partners:

TOMM70

0.594

PHB

0.557

PINK1

0.556

SAMM50

0.544

TOMM20L

0.539

LOC100469181

0.539

G1MGQ0_AILME

0.539

MFN2

0.533

MFN1

0.533

TOMM40

0.527

Your Current Organism:

Ailuropoda melanoleuca

NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G1L9B5_AILME	G1MGQ0_AILME	ENSAMEP00000003487	ENSAMEP00000018534	Uncharacterized protein.	Uncharacterized protein.	0.539
G1L9B5_AILME	LOC100469181	ENSAMEP00000003487	ENSAMEP00000016388	Uncharacterized protein.	CheR domain-containing protein.	0.539
G1L9B5_AILME	MFN1	ENSAMEP00000003487	ENSAMEP00000011386	Uncharacterized protein.	Mitofusin 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.533
G1L9B5_AILME	MFN2	ENSAMEP00000003487	ENSAMEP00000010614	Uncharacterized protein.	Mitofusin 2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.533
G1L9B5_AILME	PHB	ENSAMEP00000003487	ENSAMEP00000013027	Uncharacterized protein.	Prohibitin.	0.557
G1L9B5_AILME	PINK1	ENSAMEP00000003487	ENSAMEP00000003155	Uncharacterized protein.	PTEN induced kinase 1.	0.556
G1L9B5_AILME	SAMM50	ENSAMEP00000003487	ENSAMEP00000007044	Uncharacterized protein.	SAMM50 sorting and assembly machinery component.	0.544
G1L9B5_AILME	TOMM20L	ENSAMEP00000003487	ENSAMEP00000002704	Uncharacterized protein.	Translocase of outer mitochondrial membrane 20 like.	0.539
G1L9B5_AILME	TOMM40	ENSAMEP00000003487	ENSAMEP00000013451	Uncharacterized protein.	Translocase of outer mitochondrial membrane 40.	0.527
G1L9B5_AILME	TOMM70	ENSAMEP00000003487	ENSAMEP00000004189	Uncharacterized protein.	Translocase of outer mitochondrial membrane 70.	0.594
G1MGQ0_AILME	G1L9B5_AILME	ENSAMEP00000018534	ENSAMEP00000003487	Uncharacterized protein.	Uncharacterized protein.	0.539
G1MGQ0_AILME	MFN1	ENSAMEP00000018534	ENSAMEP00000011386	Uncharacterized protein.	Mitofusin 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.489
G1MGQ0_AILME	MFN2	ENSAMEP00000018534	ENSAMEP00000010614	Uncharacterized protein.	Mitofusin 2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.588
G1MGQ0_AILME	PINK1	ENSAMEP00000018534	ENSAMEP00000003155	Uncharacterized protein.	PTEN induced kinase 1.	0.864
G1MGQ0_AILME	SAMM50	ENSAMEP00000018534	ENSAMEP00000007044	Uncharacterized protein.	SAMM50 sorting and assembly machinery component.	0.466
G1MGQ0_AILME	TOMM40	ENSAMEP00000018534	ENSAMEP00000013451	Uncharacterized protein.	Translocase of outer mitochondrial membrane 40.	0.963
G1MGQ0_AILME	TOMM70	ENSAMEP00000018534	ENSAMEP00000004189	Uncharacterized protein.	Translocase of outer mitochondrial membrane 70.	0.961
LOC100469181	G1L9B5_AILME	ENSAMEP00000016388	ENSAMEP00000003487	CheR domain-containing protein.	Uncharacterized protein.	0.539
LOC100469181	PINK1	ENSAMEP00000016388	ENSAMEP00000003155	CheR domain-containing protein.	PTEN induced kinase 1.	0.575
LOC100469181	TOMM40	ENSAMEP00000016388	ENSAMEP00000013451	CheR domain-containing protein.	Translocase of outer mitochondrial membrane 40.	0.699