STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFTPCSurfactant protein C. (196 aa)    
Predicted Functional Partners:
SFTPB
Surfactant protein B.
   
 
 0.994
SFTPD
Surfactant protein D.
   
 
 0.946
SCGB1A1
Secretoglobin family 1A member 1.
   
  
 0.898
AGER
Advanced glycosylation end-product specific receptor.
   
  
 0.879
SCGB3A2
Secretoglobin family 3A member 2.
   
  
 0.875
NKX2-1
NK2 homeobox 1.
   
 
 0.824
TMEM79
Transmembrane protein 79.
    
 
 0.811
APP
Amyloid beta precursor protein.
    
 
 0.804
NAPSA
Napsin A aspartic peptidase; Belongs to the peptidase A1 family.
   
 
 0.788
ADGRF5
Adhesion G protein-coupled receptor F5; Belongs to the G-protein coupled receptor 2 family.
   
 
 0.771
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.