STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYDGFMyeloid derived growth factor. (150 aa)    
Predicted Functional Partners:
SSR4
Signal sequence receptor subunit 4.
   
  
 0.662
COPE
Coatomer protein complex subunit epsilon.
   
  
 0.647
GNPTG
N-acetylglucosamine-1-phosphate transferase subunit gamma.
   
   0.587
IL25
Interleukin 25.
      
 0.562
TXNDC11
Thioredoxin domain containing 11.
   
  
 0.553
SDF2L1
Stromal cell derived factor 2 like 1.
   
  
 0.549
SACM1L
SAC1 like phosphatidylinositide phosphatase.
      
 0.542
FDX2
2Fe-2S ferredoxin-type domain-containing protein.
      
 0.491
PDIA6
Protein disulfide isomerase family A member 6; Belongs to the protein disulfide isomerase family.
   
  
 0.474
G1LPC6_AILME
BZIP domain-containing protein.
   
 
  0.466
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.