STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LGI3Leucine rich repeat LGI family member 3. (548 aa)    
Predicted Functional Partners:
MTUS1
Microtubule associated scaffold protein 1.
    
 
 0.770
ADAM11
ADAM metallopeptidase domain 11.
   
 
 0.602
ADAM22
ADAM metallopeptidase domain 22.
   
 
 0.585
ADAM23
ADAM metallopeptidase domain 23.
   
 
 0.581
WDR4
tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family.
   
  
 0.534
LRRC7
Leucine rich repeat containing 7.
    
 
 0.532
SFTPC
Surfactant protein C.
   
  
 0.512
RNF186
Ring finger protein 186.
    
 
 0.456
NME6
Nucleoside diphosphate kinase.
   
  
 0.446
GOT1L1
Glutamic-oxaloacetic transaminase 1 like 1.
      
 0.435
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.