STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTC38Tetratricopeptide repeat domain 38. (469 aa)    
Predicted Functional Partners:
FAM118A
Family with sequence similarity 118 member A.
      
 0.746
TRMU
tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase.
      
 0.730
KIAA1958
KIAA1958.
      
 0.676
CLIP3
CAP-Gly domain containing linker protein 3.
      
 0.615
RCAN3
RCAN family member 3.
      
 0.603
ENOSF1
Enolase superfamily member 1.
      
 0.548
G1LHQ8_AILME
Uncharacterized protein.
      
 0.527
ZCCHC17
Uncharacterized protein.
      
 0.527
PTER
Phosphotriesterase related.
      
 0.521
PLXDC2
Plexin domain containing 2.
      
 0.517
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.