STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGGHGProtein-glucosylgalactosylhydroxylysine glucosidase. (753 aa)    
Predicted Functional Partners:
PUDP
Pseudouridine 5'-phosphatase.
  
 
 0.932
GALM
Galactose mutarotase.
  
 
 0.876
GNE
Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase.
    
 0.871
YIPF6
Protein YIPF.
  
 0.651
LOC100465041
Alpha-amylase.
  
 
 0.623
ALKBH3
AlkB homolog 3, alpha-ketoglutaratedependent dioxygenase.
  
 
 0.623
SLC3A1
Solute carrier family 3 member 1.
  
 
 0.623
SLC3A2
Solute carrier family 3 member 2.
  
 
 0.623
ALKBH2
AlkB homolog 2, alpha-ketoglutarate dependent dioxygenase.
  
 
 0.623
KIAA0513
KIAA0513.
  
 
 0.623
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.