STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBAC1UBA domain containing 1. (369 aa)    
Predicted Functional Partners:
RNF123
Ring finger protein 123.
   
 
 0.802
EPN1
Epsin 1.
   
  
 0.733
PMPCA
Peptidase, mitochondrial processing alpha subunit; Belongs to the peptidase M16 family.
   
  
 0.630
CAMSAP1
Calmodulin regulated spectrin associated protein 1.
 
    
 0.623
IMPG2
Interphotoreceptor matrix proteoglycan 2.
      
 0.613
SNAPC4
Uncharacterized protein.
      
 0.609
SURF4
Surfeit 4.
      
 0.609
SURF6
Surfeit 6.
      
 0.606
USP20
Ubiquitinyl hydrolase 1.
      
 0.595
PGLS
6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
      
 0.591
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.