STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GTF3C6General transcription factor IIIC subunit 6. (215 aa)    
Predicted Functional Partners:
GTF3C5
General transcription factor IIIC subunit 5.
   
 0.906
GTF3C4
General transcription factor IIIC subunit 4.
    
 0.900
GTF3C1
General transcription factor IIIC subunit 1.
    
 0.884
GTF3C3
General transcription factor IIIC subunit 3.
    
 0.866
GTF3C2
General transcription factor IIIC subunit 2.
    
 0.824
SERBP1
SERPINE1 mRNA binding protein 1.
      
 0.759
GUCY2C
Guanylate cyclase.
      
 0.757
CYTB
Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain. The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c. Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis.
      
 0.697
BRF1
BRF1 RNA polymerase III transcription initiation factor subunit.
     
  0.608
ZNF512
Zinc finger protein 512.
    
 0.572
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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