STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC187Coiled-coil domain containing 187. (907 aa)    
Predicted Functional Partners:
RADIL
Rap associating with DIL domain.
    
 
 0.632
NUTM1
NUT midline carcinoma family member 1.
    
 
 0.578
PRMT2
Protein arginine methyltransferase 2; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
      
 0.571
AGGF1
Uncharacterized protein.
      
 0.529
FAM71F1
Family with sequence similarity 71 member F1.
   
 
 0.527
CCDC54
Coiled-coil domain containing 54.
      
 0.512
TMCO2
Transmembrane and coiled-coil domains 2.
      
 0.512
LOC100470610
Uncharacterized protein.
      
 0.512
CAB39L
Calcium binding protein 39 like.
      
 0.495
FAM81B
Family with sequence similarity 81 member B.
      
 0.487
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.