STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC85ACoiled-coil domain containing 85A. (546 aa)    
Predicted Functional Partners:
ARHGAP21
Rho GTPase activating protein 21.
    
 
 0.650
LY6H
Lymphocyte antigen 6 family member H.
      
 0.604
ARVCF
ARVCF delta catenin family member.
    
 
 0.532
DTD2
D-aminoacyl-tRNA deacylase 2.
      
 0.530
CCDC88A
Coiled-coil domain containing 88A.
      
 0.517
LOC100465119
Olfactory receptor.
      
 0.514
KIAA1841
KIAA1841.
      
 0.512
UNC5CL
Unc-5 family C-terminal like.
      
 0.505
ETAA1
ETAA1 activator of ATR kinase.
      
 0.505
SLC25A16
Solute carrier family 25 member 16; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.505
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.