STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEIL3Nei like DNA glycosylase 3. (602 aa)    
Predicted Functional Partners:
NEIL1
Nei like DNA glycosylase 1.
     
 0.975
NEIL2
Nei like DNA glycosylase 2.
     
 0.915
DLGAP5
DLG associated protein 5.
   
  
 0.764
MUTYH
Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs.
  
  
 0.747
TRAIP
TRAF interacting protein.
   
  
 0.733
COASY
Coenzyme A synthase.
  
  
 0.715
FEN1
Flap structure-specific endonuclease 1.
  
  
 0.676
FANCI
FA complementation group I.
   
  
 0.625
TINF2
TERF1 interacting nuclear factor 2.
    
 0.621
TOP2A
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.
  
  
 0.619
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.