STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
REREArginine-glutamic acid dipeptide repeats. (1505 aa)    
Predicted Functional Partners:
NR2E1
Nuclear receptor subfamily 2 group E member 1.
    
 0.657
DYM
Dymeclin.
      
 0.639
UNC79
Unc-79 homolog, NALCN channel complex subunit.
      
 0.628
ZFHX2
Zinc finger homeobox 2.
   
  
 0.625
BTBD7
BTB domain containing 7.
      
 0.612
UBR7
UBR-type domain-containing protein.
      
 0.603
NAA35
N(alpha)-acetyltransferase 35, NatC auxiliary subunit.
      
 0.580
AKAP6
A-kinase anchoring protein 6.
      
 0.546
PIK3CD
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.
      
 0.544
SLC45A1
Solute carrier family 45 member 1.
      
 0.539
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.