STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBXN7UBX domain-containing protein 7. (469 aa)    
Predicted Functional Partners:
UFD1
Ubiquitin recognition factor in ER associated degradation 1.
   
 0.998
NPLOC4
NPL4 homolog, ubiquitin recognition factor.
   
 0.993
VCP
Valosin containing protein; Belongs to the AAA ATPase family.
   
 0.992
ELOC
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
   
 0.989
CUL2
Cullin 2; Belongs to the cullin family.
   
 0.987
UBXN1
UBX domain protein 1.
   
 0.980
SPATA5L1
Spermatogenesis associated 5 like 1.
   
 0.978
FAF1
Fas associated factor 1.
   
0.976
FAF2
Fas associated factor family member 2.
   
 0.972
FAAP100
FA core complex associated protein 100.
   
 0.971
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.