STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MARCHF10Membrane associated ring-CH-type finger 10. (817 aa)    
Predicted Functional Partners:
CFAP100
Cilia and flagella associated protein 100.
   
  
 0.716
QRICH1
Glutamine rich 1.
      
 0.710
RAD18
RAD18 E3 ubiquitin protein ligase.
   
  
 0.702
UBA7
Ubiquitin like modifier activating enzyme 7; Belongs to the ubiquitin-activating E1 family.
    
 
 0.701
NCK1
Cytoplasmic protein.
      
 0.693
MARCHF3
Membrane associated ring-CH-type finger 3.
      
 0.676
TSSK4
Testis specific serine kinase 4.
   
  
 0.632
CABYR
Calcium binding tyrosine phosphorylation regulated.
    
 
 0.618
MARCHF11
Membrane associated ring-CH-type finger 11.
      
 0.613
EFCAB3
EF-hand calcium binding domain 3.
     
 0.611
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.