STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEMA5ASemaphorin 5A. (1073 aa)    
Predicted Functional Partners:
PLXNB1
Plexin B1.
    
 0.918
PLXNB3
Plexin B3.
    
0.918
SEMA5B
Semaphorin 5B.
  
  
 
0.901
PLXNC1
Plexin C1.
    
 0.750
PLXNA1
Plexin A1.
    
 0.742
PLXNA3
Plexin A3.
    
 0.703
PLXNB2
Plexin B2.
    
0.612
PLXND1
Plexin D1.
    
 0.586
MET
MET proto-oncogene, receptor tyrosine kinase.
    
 0.570
MST1R
Macrophage stimulating 1 receptor.
    
 0.570
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.