STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNNPinin, desmosome associated protein. (759 aa)    
Predicted Functional Partners:
SAP18
Sin3A associated protein 18.
    
 0.997
RNPS1
RNA binding protein with serine rich domain 1.
   
 0.980
PNISR
PNN interacting serine and arginine rich protein.
   
 
 0.931
ACIN1
Apoptotic chromatin condensation inducer 1.
   
 0.904
LUC7L3
LUC7 like 3 pre-mRNA splicing factor.
   
 
 0.901
EIF4A3
Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.
   
 0.872
MAGOHB
Mago homolog B, exon junction complex subunit.
   
 0.829
MAGOH
Mago homolog, exon junction complex subunit.
   
 0.829
PRPF4B
Pre-mRNA processing factor 4B.
   
 0.820
SRRM1
Serine and arginine repetitive matrix 1.
   
 0.806
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.