STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMIGD1Transmembrane and immunoglobulin domain containing 1. (261 aa)    
Predicted Functional Partners:
GUCA2A
Guanylate cyclase activator 2A.
   
  
 0.672
PKHD1
Uncharacterized protein.
      
 0.495
PCNX3
Pecanex 3.
      
 0.489
CLRN3
Clarin 3.
   
  
 0.452
CRYZL1
Crystallin zeta like 1.
      
 0.442
UTP18
UTP18 small subunit processome component.
      
 0.438
SNAPC1
Small nuclear RNA activating complex polypeptide 1.
      
 0.437
ENDOD1
Endonuclease domain containing 1.
      
 0.435
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.