STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5orf34Chromosome 5 open reading frame 34. (640 aa)    
Predicted Functional Partners:
COPS8
COP9 signalosome subunit 8.
      
 0.715
CCDC124
Coiled-coil domain containing 124.
      
 0.696
HAAO
3-hydroxyanthranilate 3,4-dioxygenase.
      
 0.506
TMEM267
Transmembrane protein 267.
      
 0.479
C8orf82
Chromosome 8 open reading frame 82.
      
 0.457
NIM1K
NIM1 serine/threonine protein kinase; Belongs to the protein kinase superfamily.
      
 0.450
SLC15A5
Solute carrier family 15 member 5.
      
 0.436
SPATC1
Spermatogenesis and centriole associated 1.
      
 0.436
TMEM160
Transmembrane protein 160.
      
 0.435
PGAP2
Post-GPI attachment to proteins 2.
      
 0.435
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.