Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BLMHBleomycin hydrolase; Belongs to the peptidase C1 family. (455 aa)    
Predicted Functional Partners:
NUDT12
Nudix hydrolase 12.
    
 
 0.942
KERA
Keratocan.
   
   0.811
CASP14
Caspase 14; Belongs to the peptidase C14A family.
    
 
 0.609
G1LVN7_AILME
Uncharacterized protein; Belongs to the peptidase C14A family.
    
 
 0.603
SPATA4
Spermatogenesis associated 4.
      
 0.601
APP
Amyloid beta precursor protein.
    
 
 0.594
BPHL
Biphenyl hydrolase like.
      
 0.593
PALB2
Partner and localizer of BRCA2.
      
 0.559
STUB1
STIP1 homology and U-box containing protein 1.
      
 0.558
NUDT13
Nudix hydrolase 13.
    
 
 0.530
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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