STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KDM8Lysine demethylase 8. (417 aa)    
Predicted Functional Partners:
RABEP2
Rabaptin, RAB GTPase binding effector protein 2.
      
 0.728
RCCD1
Uncharacterized protein.
    
 
 0.616
MTA3
Metastasis associated 1 family member 3.
      
 0.611
ORC4
Origin recognition complex subunit 4; Component of the origin recognition complex (ORC) that binds origins of replication; Belongs to the ORC4 family.
   
  
 0.528
AUNIP
Aurora kinase A and ninein interacting protein.
      
 0.527
ING5
Inhibitor of growth protein.
      
 0.526
PMPCA
Peptidase, mitochondrial processing alpha subunit; Belongs to the peptidase M16 family.
      
 0.513
DMXL2
Dmx like 2.
      
 0.506
SETD1B
SET domain containing 1B, histone lysine methyltransferase.
      
 0.471
CAPN7
Calpain 7; Belongs to the peptidase C2 family.
   
 
 0.464
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.