STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCUBE2Signal peptide, CUB domain and EGF like domain containing 2. (990 aa)    
Predicted Functional Partners:
HHAT
Hedgehog acyltransferase; Belongs to the membrane-bound acyltransferase family.
    
 
 0.760
GCC2
GRIP and coiled-coil domain containing 2.
    
 0.589
RASL12
RAS like family 12.
    
 0.555
BOC
BOC cell adhesion associated, oncogene regulated.
    
 0.554
RASIP1
Ras interacting protein 1.
   
 
 0.550
G1LA64_AILME
EGF-like domain-containing protein.
      
 0.521
CDON
Cell adhesion associated, oncogene regulated.
    
 0.515
TBC1D8B
TBC1 domain family member 8B.
   
  
 0.514
NR2C1
Nuclear receptor subfamily 2 group C member 1.
    
 0.513
C1R
Complement C1r; Belongs to the peptidase S1 family.
    
 0.508
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.