STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CORO6Coronin; Belongs to the WD repeat coronin family. (500 aa)    
Predicted Functional Partners:
ARHGEF5
Rho guanine nucleotide exchange factor 5.
      
 0.759
SCIN
Scinderin.
 
 
  
 0.670
IRGQ
Immunity related GTPase Q.
   
 
 0.648
RAPGEF1
Rap guanine nucleotide exchange factor 1.
   
 
 0.632
ELMO2
Engulfment and cell motility 2.
   
  
 0.616
DHFR
DHFR domain-containing protein; Belongs to the dihydrofolate reductase family.
    
 0.571
SORBS1
Sorbin and SH3 domain containing 1.
   
 
 0.553
RGL3
Ral guanine nucleotide dissociation stimulator like 3.
      
 0.531
GSN
Gelsolin.
 
 
  
 0.529
CFL2
Cofilin 2; Belongs to the actin-binding proteins ADF family.
   
 
 0.524
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.