STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRCH3Leucine rich repeats and calponin homology domain containing 3. (800 aa)    
Predicted Functional Partners:
DOCK8
Dedicator of cytokinesis 8; Belongs to the DOCK family.
   
 
 0.719
ZDHHC19
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.689
DOCK7
Dedicator of cytokinesis 7; Belongs to the DOCK family.
   
 
 0.671
DOCK6
Dedicator of cytokinesis 6; Belongs to the DOCK family.
   
 
 0.659
PPP6R1
Protein phosphatase 6 regulatory subunit 1.
   
  
 0.641
ANKRD28
Ankyrin repeat domain 28.
    
 0.637
RMND5A
Required for meiotic nuclear division 5 homolog A.
   
  
 0.617
PYROXD2
Pyridine nucleotide-disulphide oxidoreductase domain 2.
      
 0.608
TPD52L2
TPD52 like 2.
      
 0.607
PCYT1A
Phosphate cytidylyltransferase 1, choline, alpha.
      
 0.603
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.