STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCP1BDecapping mRNA 1B. (614 aa)    
Predicted Functional Partners:
DCP1A
Decapping mRNA 1A.
  
 
0.992
EDC3
Enhancer of mRNA decapping 3.
   
 0.984
DCP2
Decapping mRNA 2.
    
 0.978
EDC4
Enhancer of mRNA decapping 4.
    
 0.975
DDX6
DEAD-box helicase 6; Belongs to the DEAD box helicase family.
   
 0.974
XRN1
5'-3' exoribonuclease 1.
    
 0.948
NAXE
NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX.
   
 0.828
PATL1
PAT1 homolog 1, processing body mRNA decay factor.
    
 0.808
PATL2
PAT1 homolog 2.
    
 0.808
KIFBP
KIF1 binding protein.
   
 0.802
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.