STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZRANB1Zinc finger RANBP2-type containing 1. (708 aa)    
Predicted Functional Partners:
APC
APC regulator of WNT signaling pathway.
    
  0.925
RPS27A
Ubiquitin-like domain-containing protein.
   
 0.815
UBB
Ubiquitin B.
   
 0.815
TRAF6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.813
OTUD3
OTU deubiquitinase 3.
      
 0.763
USP13
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
      
 0.699
UBXN7
UBX domain-containing protein 7.
   
 
 0.659
OTULIN
OTU deubiquitinase with linear linkage specificity.
   
 
 0.651
MYSM1
Myb like, SWIRM and MPN domains 1.
   
  
 0.628
USP50
Ubiquitin specific peptidase 50; Belongs to the peptidase C19 family.
      
 0.612
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.