STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MATN4Matrilin 4. (623 aa)    
Predicted Functional Partners:
EPYC
Epiphycan.
   
 0.779
COMP
Cartilage oligomeric matrix protein.
   
 0.717
COL9A3
Collagen type IX alpha 3 chain.
   
 0.645
LUM
Lumican.
   
 0.644
GAS2
Growth arrest specific 2.
    
 0.633
CNMD
Chondromodulin.
   
 0.584
THBS4
Thrombospondin 4.
   
 0.529
MMRN2
Multimerin 2.
   
 0.518
CHD1L
Chromodomain helicase DNA binding protein 1 like.
    
 0.500
LINGO2
Leucine rich repeat and Ig domain containing 2.
    
 0.495
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.