STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GTF3C5General transcription factor IIIC subunit 5. (517 aa)    
Predicted Functional Partners:
GTF3C3
General transcription factor IIIC subunit 3.
   
 0.995
GTF3C4
General transcription factor IIIC subunit 4.
   
 0.969
GTF3C2
General transcription factor IIIC subunit 2.
   
 0.964
GTF3C1
General transcription factor IIIC subunit 1.
   
 0.949
GTF3C6
General transcription factor IIIC subunit 6.
   
 0.906
BRF1
BRF1 RNA polymerase III transcription initiation factor subunit.
    
 0.810
BRF2
BRF2 RNA polymerase III transcription initiation factor subunit.
    
 0.810
BDP1
B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB.
    
 0.790
POLR3A
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.765
POLR3K
RNA polymerase III subunit K; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
 0.749
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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