STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100475689Uncharacterized protein. (287 aa)    
Predicted Functional Partners:
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 0.687
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 0.672
G1LVJ8_AILME
RRM domain-containing protein.
  
 0.654
ALYREF
Aly/REF export factor.
  
 0.654
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
   
 0.646
G1LIT5_AILME
RRM domain-containing protein.
   
 0.645
TRA2B
Transformer 2 beta homolog.
  
 0.645
SRSF2
RRM domain-containing protein.
  
 0.620
HNRNPU
Heterogeneous nuclear ribonucleoprotein U.
   
 0.608
G1L799_AILME
Uncharacterized protein.
  
 0.600
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.