STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100475689Uncharacterized protein. (287 aa)    
Predicted Functional Partners:
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 0.955
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
  
0.946
PCBP1
Poly(rC) binding protein 1.
   
 0.934
RBMX
RNA binding motif protein X-linked.
  
 
0.931
ALYREF
Aly/REF export factor.
  
 0.675
SRSF2
RRM domain-containing protein.
  
 0.637
G1L799_AILME
Uncharacterized protein.
  
 0.594
TRA2B
Transformer 2 beta homolog.
  
 0.590
TRA2A
Transformer 2 alpha homolog.
  
 0.574
PTBP1
Polypyrimidine tract binding protein 1.
   
 0.569
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.