STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERC1ELKS/RAB6-interacting/CAST family member 1. (1116 aa)    
Predicted Functional Partners:
ZFPL1
Zinc finger protein like 1.
      
 0.757
RAD9A
Cell cycle checkpoint control protein; Belongs to the rad9 family.
      
 0.752
ADSL
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
      
 0.750
G1LGB6_AILME
Uncharacterized protein.
    
 
 0.723
G1LGE8_AILME
Uncharacterized protein.
    
 
 0.723
PANDA_020942
RabBD domain-containing protein.
    
 
 0.723
DBN1
Drebrin 1.
    
 
 0.710
PRAME
Preferentially expressed antigen in melanoma.
    
 
 0.707
GIT1
GIT ArfGAP 1.
    
 
 0.706
GOLGB1
Golgin B1.
    
 
 0.694
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.