STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C13orf46Chromosome 13 open reading frame 46. (210 aa)    
Predicted Functional Partners:
C8H1orf115
Uncharacterized protein.
      
 0.535
ERG28
Ergosterol biosynthesis 28 homolog.
      
 0.511
IQCF1
IQ motif containing F1.
      
 0.457
SLC39A3
Solute carrier family 39 member 3.
      
 0.451
FLVCR2
Feline leukemia virus subgroup C cellular receptor family member 2.
      
 0.437
MARK1
Non-specific serine/threonine protein kinase.
      
 0.435
RASA3
RAS p21 protein activator 3.
      
 0.400
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.