STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H1-8H1 histone family member O oocyte specific. (354 aa)    
Predicted Functional Partners:
H1-0
H1 histone family member 0.
    
 
 0.697
G1M047_AILME
H15 domain-containing protein.
      
 0.606
KPNB1
Karyopherin subunit beta 1.
    
   0.567
BMP15
Bone morphogenetic protein 15.
   
  
 0.567
MTIF3
Mitochondrial translational initiation factor 3.
      
 0.532
YBEY
YbeY metalloendoribonuclease.
      
 0.526
LOC100465110
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
   
 0.519
SEBOX
SEBOX homeobox.
      
 0.513
GDF9
Growth differentiation factor 9.
      
 0.513
H1-10
H1 histone family member X.
   
 
 0.508
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.