STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPTBN1Spectrin beta chain; Belongs to the spectrin family. (2363 aa)    
Predicted Functional Partners:
SPTAN1
Spectrin alpha, non-erythrocytic 1.
   
0.865
SPTA1
Spectrin alpha, erythrocytic 1.
   
0.857
ITSN2
Intersectin 2.
     
 0.641
IGSF22
Immunoglobulin superfamily member 22.
   
 0.627
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
    
 0.580
ANK1
Ankyrin 1.
   
 0.559
ANK3
Ankyrin 3.
   
 0.559
G1LIR2_AILME
ANK_REP_REGION domain-containing protein.
   
 0.559
ANK2
Ankyrin 2.
   
 0.559
ANKRD60
Ankyrin repeat domain 60.
   
 0.559
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.