STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RLFRearranged L-myc fusion. (1910 aa)    
Predicted Functional Partners:
WBP1L
WW domain binding protein 1 like.
    
 0.754
COLCA2
Colorectal cancer associated 2.
      
 0.749
C21orf91
Chromosome 21 open reading frame 91.
      
 0.712
HIGD1A
HIG1 hypoxia inducible domain family member 1A.
      
 0.691
FBXL17
F-box and leucine rich repeat protein 17.
   
 
 0.657
KLHL7
Kelch like family member 7.
    
 0.622
UAP1
UDP-N-acetylglucosamine pyrophosphorylase 1.
      
 0.611
FAM183A
Family with sequence similarity 183 member A.
      
 0.605
UFC1
Ubiquitin-fold modifier conjugating enzyme 1.
      
 0.604
SMCHD1
Structural maintenance of chromosomes flexible hinge domain containing 1.
   
  
 0.559
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.