STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KDM5ALysine demethylase 5A. (1690 aa)    
Predicted Functional Partners:
ATP5F1D
ATP synthase F1 subunit delta.
  
 0.892
ATP5F1C
ATP synthase subunit gamma.
  
 0.892
ATP5F1A
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
 0.892
ATP5PO
Uncharacterized protein.
  
 0.891
ATP6
ATP synthase subunit a.
  
 0.891
ATP5PD
ATP synthase peripheral stalk subunit d.
   
 0.794
ATP5PB
ATP synthase peripheral stalk-membrane subunit b.
   
 0.780
KDM3A
Lysine demethylase 3A.
   
 
 0.758
KDM3B
Lysine demethylase 3B.
   
 
 0.752
ATP5F1E
ATP synthase F1 subunit epsilon.
    
 0.733
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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