STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR47WD repeat domain 47. (927 aa)    
Predicted Functional Partners:
CAMSAP3
Calmodulin regulated spectrin associated protein family member 3.
 
 
 
 0.757
FBXO33
F-box protein 33.
      
 0.751
CAMSAP2
Calmodulin regulated spectrin associated protein family member 2.
 
 
 
 0.717
CNOT6
CCR4-NOT transcription complex subunit 6.
      
 0.705
WDR78
WD repeat domain 78.
      
 0.687
ARHGEF12
Rho guanine nucleotide exchange factor 12.
      
 0.613
WDR37
WD repeat domain 37.
      
 0.593
CAMSAP1
Calmodulin regulated spectrin associated protein 1.
 
 
 
 0.584
KLC2
Kinesin light chain 2.
      
 0.545
LSMEM1
Leucine rich single-pass membrane protein 1.
      
 0.534
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.