STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPECC1Sperm antigen with calponin homology and coiled-coil domains 1. (978 aa)    
Predicted Functional Partners:
NT5C1B
Uncharacterized protein.
      
 0.717
AKR1E2
Aldo-keto reductase family 1 member E2.
   
  
 0.622
KLHL20
Kelch like family member 20.
   
  
 0.557
KANK1
KN motif and ankyrin repeat domains 1.
    
 
 0.534
ALX1
ALX homeobox 1.
      
 0.531
TBCD
Tubulin folding cofactor D.
      
 0.509
EVX2
Even-skipped homeobox 2.
      
 0.502
GRIA1
Glutamate ionotropic receptor AMPA type subunit 1.
      
 0.497
CYP26B1
Cytochrome P450 family 26 subfamily B member 1; Belongs to the cytochrome P450 family.
      
 0.485
ABL2
Tyrosine-protein kinase.
   
  
 0.466
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.