STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RABAC1PRA1 family protein. (185 aa)    
Predicted Functional Partners:
COPE
Coatomer protein complex subunit epsilon.
   
  
 0.714
YIF1A
Yip1 interacting factor homolog A, membrane trafficking protein.
   
 
 0.634
YIF1B
Yip1 interacting factor homolog B, membrane trafficking protein.
   
 
 0.625
MOB3C
MOB kinase activator 3C.
      
 0.613
AKAP6
A-kinase anchoring protein 6.
      
 0.608
SLC4A3
Anion exchange protein.
      
 0.608
NSF
N-ethylmaleimide sensitive factor, vesicle fusing ATPase.
      
 0.592
MARVELD1
MARVEL domain containing 1.
      
 0.544
MYADML2
Myeloid associated differentiation marker like 2.
      
 0.542
AGBL4
Peptidase_M14 domain-containing protein.
      
 0.529
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.