STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF111Ring finger protein 111. (1002 aa)    
Predicted Functional Partners:
SMAD7
Mothers against decapentaplegic homolog.
   
 0.968
SMAD6
MH2 domain-containing protein.
   
 0.734
UBB
Ubiquitin B.
    
 0.721
RPS27A
Ubiquitin-like domain-containing protein.
    
 0.699
UBE2V2
Ubiquitin conjugating enzyme E2 V2.
   
 0.668
ANAPC10
DOC domain-containing protein.
   
  
 0.620
TRIM35
Tripartite motif containing 35.
   
 
 0.613
RNF123
Ring finger protein 123.
     
 0.613
SLC25A46
Solute carrier family 25 member 46; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.601
G1MPB9_AILME
Small ubiquitin-related modifier.
   
 0.587
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.