STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC62SEC62 homolog, preprotein translocation factor. (399 aa)    
Predicted Functional Partners:
SEC63
SEC63 homolog, protein translocation regulator.
   
 0.999
SEC61G
SEC61 translocon gamma subunit.
    
 
 0.965
SEC61B
SEC61 translocon beta subunit.
    
 
 0.881
SEC61A2
SEC61 translocon alpha 2 subunit; Belongs to the SecY/SEC61-alpha family.
   
 
 0.856
SEC61A1
SEC61 translocon alpha 1 subunit.
   
 
 0.856
STK39
Serine/threonine kinase 39.
    
 
 0.850
OXSR1
Oxidative stress responsive kinase 1.
    
 
 0.850
CCPG1
Cell cycle progression 1.
   
 
 0.717
STRADA
STE20 related adaptor alpha.
    
 
 0.698
STRADB
STE20 related adaptor beta.
    
 
 0.698
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.