STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCC1GRIP and coiled-coil domain containing 1. (776 aa)    
Predicted Functional Partners:
BYSL
Bystin like.
   
 0.931
TSR1
TSR1 ribosome maturation factor.
   
 0.912
NOB1
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
   
 0.907
IMP3
IMP U3 small nucleolar ribonucleoprotein 3.
   
 0.889
RIOK2
RIO kinase 2.
   
 0.881
LTV1
LTV1 ribosome biogenesis factor.
   
 0.880
AATF
Apoptosis antagonizing transcription factor.
   
 
 0.872
IMP4
IMP U3 small nucleolar ribonucleoprotein 4.
   
 
 0.855
HEATR1
HEAT repeat containing 1.
   
 
 0.853
RPS9
Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
   
 0.852
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.