STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP6NLUSP6 N-terminal like. (829 aa)    
Predicted Functional Partners:
KCTD7
Uncharacterized protein.
   
 0.583
RAB19
RAB19, member RAS oncogene family.
    
 0.582
SGCZ
Sarcoglycan zeta.
      
 0.476
ZNF407
Zinc finger protein 407.
    
 
 0.456
BCO2
Beta-carotene oxygenase 2.
      
 0.453
PROSER2
Proline and serine rich 2.
      
 0.444
G1LV39_AILME
Uncharacterized protein.
    
 
 0.444
AGMO
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
    
 
 0.444
RAB5A
RAB5A, member RAS oncogene family.
    
 0.400
RAB5B
RAB5B, member RAS oncogene family.
    
 0.400
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.