STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MIER1MIER1 transcriptional regulator. (565 aa)    
Predicted Functional Partners:
CDYL
Chromodomain Y like.
   
 
 0.968
BAHD1
Bromo adjacent homology domain containing 1.
    
 
 0.952
C16orf87
Chromosome 16 open reading frame 87.
    
   0.932
ARID5B
AT-rich interaction domain 5B.
    
   0.872
CYBRD1
Cytochrome b reductase 1.
    
   0.808
EHMT2
Euchromatic histone lysine methyltransferase 2.
    
   0.808
MIER3
MIER family member 3.
    
   0.806
HDAC2
Histone deacetylase 2.
    
 
 0.725
HDAC1
Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.
    
 
 0.721
ANAPC15
Anaphase promoting complex subunit 15.
      
 0.692
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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